ZHONGCHA56017 (EMB1968, RFC4)


Aliases : EMB1968, RFC4

Description : Replication factor C subunit 2 & original description: none


Gene families : OG0015217 (OrthoFinder) Phylogenetic Tree(s): OG0015217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZHONGCHA56017
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
FUDINGDABAI39369 EMB1968, RFC4 Replication factor C subunit 2 & original description: none 0.07 OrthoFinder
GWHTACFB025521 EMB1968, RFC4 Replication factor C subunit 2 & original description:... 0.03 OrthoFinder
GWHTAZTZ029171 EMB1968, RFC4 Replication factor C subunit 2 & original description:... 0.04 OrthoFinder
JINXUAN60543 EMB1968, RFC4 Replication factor C subunit 2 & original description: none 0.03 OrthoFinder
LJCHANGYE60646 EMB1968, RFC4 Replication factor C subunit 2 & original description: none 0.09 OrthoFinder
FUDINGDABAI39369 EMB1968, RFC4 Replication factor C subunit 2 & original description: none 0.07 OrthoFinder
GWHTACFB025521 EMB1968, RFC4 Replication factor C subunit 2 & original description:... 0.03 OrthoFinder
GWHTAZTZ029171 EMB1968, RFC4 Replication factor C subunit 2 & original description:... 0.04 OrthoFinder
JINXUAN60543 EMB1968, RFC4 Replication factor C subunit 2 & original description: none 0.03 OrthoFinder
LJCHANGYE60646 EMB1968, RFC4 Replication factor C subunit 2 & original description: none 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003724 RNA helicase activity IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
CC GO:0009360 DNA polymerase III complex IEA Interproscan
MF GO:0009378 four-way junction helicase activity IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 45 171
IPR013748 Rep_factorC_C 240 323
No external refs found!