GWHTAZTZ023717

Description : 60S ribosomal protein L9 & original description: Protein=GWHPAZTZ023717

Gene families : OG0001836 (OrthoFinder) Phylogenetic Tree(s): OG0001836_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GWHTAZTZ023717
Cluster	HCCA: Cluster_337

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA21625	No alias	60S ribosomal protein L9 & original description: none	0.07	OrthoFinder
CSA004427.1	CSA004427	60S ribosomal protein L9 & original description: none	0.15	OrthoFinder
CSA009317.1	CSA009317	60S ribosomal protein L9 & original description: none	0.16	OrthoFinder
ECHA50564	No alias	60S ribosomal protein L9 & original description: none	0.06	OrthoFinder
FUDINGDABAI12734	No alias	60S ribosomal protein L9 & original description: none	0.15	OrthoFinder
FUDINGDABAI43723	No alias	60S ribosomal protein L9 & original description: none	0.04	OrthoFinder
GWHTACFB001033	No alias	60S ribosomal protein L9 & original description:...	0.03	OrthoFinder
GWHTACFB032241	No alias	60S ribosomal protein L9 & original description:...	0.11	OrthoFinder
HUANGJINYA15694	No alias	60S ribosomal protein L9 & original description: none	0.18	OrthoFinder
HUANGJINYA44139	No alias	60S ribosomal protein L9 & original description: none	0.21	OrthoFinder
JINXUAN17297	No alias	60S ribosomal protein L9 & original description: none	0.04	OrthoFinder
JINXUAN17298	No alias	60S ribosomal protein L9 & original description: none	0.03	OrthoFinder
LJCHANGYE19935	No alias	60S ribosomal protein L9 & original description: none	0.07	OrthoFinder
ZHONGCHA14523	No alias	60S ribosomal protein L9 & original description: none	0.14	OrthoFinder
ZIJUAN51186	No alias	60S ribosomal protein L9 & original description: none	0.03	OrthoFinder
ZIJUAN51896	No alias	60S ribosomal protein L9 & original description: none	0.06	OrthoFinder
ANJIBAICHA21625	No alias	60S ribosomal protein L9 & original description: none	0.07	OrthoFinder
CSA004427.1	CSA004427	60S ribosomal protein L9 & original description: none	0.15	OrthoFinder
CSA009317.1	CSA009317	60S ribosomal protein L9 & original description: none	0.16	OrthoFinder
CSS0000739.1	CSS0000739	60S ribosomal protein L9 & original description: gene=CSS0000739	0.16	OrthoFinder
CSS0047753.1	CSS0047753	60S ribosomal protein L9 & original description: gene=CSS0047753	0.08	OrthoFinder
ECHA50564	No alias	60S ribosomal protein L9 & original description: none	0.06	OrthoFinder
FUDINGDABAI12734	No alias	60S ribosomal protein L9 & original description: none	0.15	OrthoFinder
FUDINGDABAI43723	No alias	60S ribosomal protein L9 & original description: none	0.04	OrthoFinder
GWHTACFB001033	No alias	60S ribosomal protein L9 & original description:...	0.03	OrthoFinder
GWHTACFB032241	No alias	60S ribosomal protein L9 & original description:...	0.11	OrthoFinder
HUANGJINYA15694	No alias	60S ribosomal protein L9 & original description: none	0.18	OrthoFinder
HUANGJINYA44139	No alias	60S ribosomal protein L9 & original description: none	0.21	OrthoFinder
JINXUAN17297	No alias	60S ribosomal protein L9 & original description: none	0.04	OrthoFinder
JINXUAN17298	No alias	60S ribosomal protein L9 & original description: none	0.03	OrthoFinder
LJCHANGYE19935	No alias	60S ribosomal protein L9 & original description: none	0.07	OrthoFinder
ZHONGCHA14523	No alias	60S ribosomal protein L9 & original description: none	0.14	OrthoFinder
ZIJUAN51186	No alias	60S ribosomal protein L9 & original description: none	0.03	OrthoFinder
ZIJUAN51896	No alias	60S ribosomal protein L9 & original description: none	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000387	spliceosomal snRNP assembly	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0003870	5-aminolevulinate synthase activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016748	succinyltransferase activity	IEP	HCCA
MF	GO:0016749	N-succinyltransferase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019079	viral genome replication	IEP	HCCA
BP	GO:0022618	protein-RNA complex assembly	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
BP	GO:0032784	regulation of DNA-templated transcription elongation	IEP	HCCA
BP	GO:0032786	positive regulation of DNA-templated transcription, elongation	IEP	HCCA
BP	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0034243	regulation of transcription elongation by RNA polymerase II	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
MF	GO:0051087	protein-folding chaperone binding	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
MF	GO:0060590	ATPase regulator activity	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0071826	protein-RNA complex organization	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020040	Ribosomal_L6_a/b-dom	12	90
IPR020040	Ribosomal_L6_a/b-dom	102	181

External Links

No external refs found!

GWHTAZTZ023717

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation