GWHTAZTZ026176

Description : 60S ribosomal protein L6 & original description: Protein=GWHPAZTZ026176

Gene families : OG0004022 (OrthoFinder) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GWHTAZTZ026176
Cluster	HCCA: Cluster_337

Target	Alias	Description	ECC score	Gene Family Method
CSA031106.1	CSA031106	60S ribosomal protein L6-2 & original description: none	0.06	OrthoFinder
CSA032691.1	CSA032691	60S ribosomal protein L6 & original description: none	0.12	OrthoFinder
ECHA62741	No alias	60S ribosomal protein L6-2 & original description: none	0.05	OrthoFinder
FUDINGDABAI46679	No alias	60S ribosomal protein L6 & original description: none	0.12	OrthoFinder
FUDINGDABAI57289	No alias	60S ribosomal protein L6-2 & original description: none	0.07	OrthoFinder
GWHTACFB023847	No alias	60S ribosomal protein L6-2 & original description:...	0.15	OrthoFinder
HUANGJINYA45795	No alias	60S ribosomal protein L6 & original description: none	0.15	OrthoFinder
HUANGJINYA55962	No alias	60S ribosomal protein L6-2 & original description: none	0.08	OrthoFinder
JINXUAN52485	No alias	60S ribosomal protein L6 & original description: none	0.11	OrthoFinder
JINXUAN63064	No alias	60S ribosomal protein L6-2 & original description: none	0.03	OrthoFinder
LJCHANGYE53452	No alias	60S ribosomal protein L6 & original description: none	0.05	OrthoFinder
TIEGUANYIN34767	No alias	60S ribosomal protein L6 & original description: none	0.17	OrthoFinder
TIEGUANYIN41870	No alias	60S ribosomal protein L6-2 & original description: none	0.03	OrthoFinder
ZHONGCHA48457	No alias	60S ribosomal protein L6 & original description: none	0.11	OrthoFinder
ZHONGCHA57569	No alias	60S ribosomal protein L6-2 & original description: none	0.04	OrthoFinder
ZIJUAN43635	No alias	60S ribosomal protein L6-2 & original description: none	0.06	OrthoFinder
ZIJUAN49183	No alias	60S ribosomal protein L6 & original description: none	0.12	OrthoFinder
CSA031106.1	CSA031106	60S ribosomal protein L6-2 & original description: none	0.06	OrthoFinder
CSA032691.1	CSA032691	60S ribosomal protein L6 & original description: none	0.12	OrthoFinder
CSS0003552.1	CSS0003552	60S ribosomal protein L6 & original description: gene=CSS0003552	0.11	OrthoFinder
CSS0013847.1	CSS0013847	60S ribosomal protein L6-2 & original description:...	0.03	OrthoFinder
CSS0035029.1	CSS0035029	60S ribosomal protein L6-2 & original description:...	0.02	OrthoFinder
ECHA62741	No alias	60S ribosomal protein L6-2 & original description: none	0.05	OrthoFinder
FUDINGDABAI46679	No alias	60S ribosomal protein L6 & original description: none	0.12	OrthoFinder
FUDINGDABAI57289	No alias	60S ribosomal protein L6-2 & original description: none	0.07	OrthoFinder
GWHTACFB023847	No alias	60S ribosomal protein L6-2 & original description:...	0.15	OrthoFinder
HUANGJINYA45795	No alias	60S ribosomal protein L6 & original description: none	0.15	OrthoFinder
HUANGJINYA55962	No alias	60S ribosomal protein L6-2 & original description: none	0.08	OrthoFinder
JINXUAN52485	No alias	60S ribosomal protein L6 & original description: none	0.11	OrthoFinder
JINXUAN63064	No alias	60S ribosomal protein L6-2 & original description: none	0.03	OrthoFinder
LJCHANGYE53452	No alias	60S ribosomal protein L6 & original description: none	0.05	OrthoFinder
TIEGUANYIN34767	No alias	60S ribosomal protein L6 & original description: none	0.17	OrthoFinder
TIEGUANYIN41870	No alias	60S ribosomal protein L6-2 & original description: none	0.03	OrthoFinder
ZHONGCHA48457	No alias	60S ribosomal protein L6 & original description: none	0.11	OrthoFinder
ZHONGCHA57569	No alias	60S ribosomal protein L6-2 & original description: none	0.04	OrthoFinder
ZIJUAN43635	No alias	60S ribosomal protein L6-2 & original description: none	0.06	OrthoFinder
ZIJUAN49183	No alias	60S ribosomal protein L6 & original description: none	0.12	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
CC	GO:0000408	EKC/KEOPS complex	IEP	HCCA
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	HCCA
CC	GO:0000776	kinetochore	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005672	transcription factor TFIIA complex	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
CC	GO:0005929	cilium	IEP	HCCA
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007029	endoplasmic reticulum organization	IEP	HCCA
BP	GO:0007088	regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
MF	GO:0008097	5S rRNA binding	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009399	nitrogen fixation	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030036	actin cytoskeleton organization	IEP	HCCA
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
BP	GO:0030866	cortical actin cytoskeleton organization	IEP	HCCA
CC	GO:0031514	motile cilium	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033045	regulation of sister chromatid segregation	IEP	HCCA
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	HCCA
BP	GO:0034508	centromere complex assembly	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0048308	organelle inheritance	IEP	HCCA
BP	GO:0048309	endoplasmic reticulum inheritance	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
MF	GO:0051087	protein-folding chaperone binding	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0051783	regulation of nuclear division	IEP	HCCA
BP	GO:0051983	regulation of chromosome segregation	IEP	HCCA
MF	GO:0060590	ATPase regulator activity	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0071941	nitrogen cycle metabolic process	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0090231	regulation of spindle checkpoint	IEP	HCCA
BP	GO:0090266	regulation of mitotic cell cycle spindle assembly checkpoint	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
BP	GO:1901976	regulation of cell cycle checkpoint	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1903504	regulation of mitotic spindle checkpoint	IEP	HCCA
BP	GO:1905818	regulation of chromosome separation	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000915	60S_ribosomal_L6E	125	232
IPR005568	Ribosomal_L6_N	3	56

External Links

No external refs found!

GWHTAZTZ026176

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation