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  5. GWHTAZTZ035969

GWHTAZTZ035969


Description : RGG repeats nuclear RNA binding protein A (Fragment) & original description: Protein=GWHPAZTZ035969


Gene families : OG0018821 (OrthoFinder) Phylogenetic Tree(s): OG0018821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GWHTAZTZ035969
Cluster HCCA: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA35920 No alias RGG repeats nuclear RNA binding protein A (Fragment) &... 0.06 OrthoFinder
CSA002530.1 CSA002530 RGG repeats nuclear RNA binding protein A (Fragment) &... 0.03 OrthoFinder
HUANGJINYA27147 No alias RGG repeats nuclear RNA binding protein A (Fragment) &... 0.05 OrthoFinder
JINXUAN30827 No alias RGG repeats nuclear RNA binding protein A (Fragment) &... 0.03 OrthoFinder
TIEGUANYIN16866 No alias RGG repeats nuclear RNA binding protein A (Fragment) &... 0.07 OrthoFinder
ANJIBAICHA35920 No alias RGG repeats nuclear RNA binding protein A (Fragment) &... 0.06 OrthoFinder
CSA002530.1 CSA002530 RGG repeats nuclear RNA binding protein A (Fragment) &... 0.03 OrthoFinder
CSS0045630.1 CSS0045630 RGG repeats nuclear RNA binding protein A (Fragment) &... 0.03 OrthoFinder
HUANGJINYA27147 No alias RGG repeats nuclear RNA binding protein A (Fragment) &... 0.05 OrthoFinder
JINXUAN30827 No alias RGG repeats nuclear RNA binding protein A (Fragment) &... 0.03 OrthoFinder
TIEGUANYIN16866 No alias RGG repeats nuclear RNA binding protein A (Fragment) &... 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009399 nitrogen fixation IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0030866 cortical actin cytoskeleton organization IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0032865 ERMES complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019084 Stm1-like_N 1 71
IPR006861 HABP4_PAIRBP1-bd 156 268
No external refs found!