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  5. GWHTAZTZ038348

GWHTAZTZ038348


Description : 40S ribosomal protein S2-2 & original description: Protein=GWHPAZTZ038348


Gene families : OG0001709 (OrthoFinder) Phylogenetic Tree(s): OG0001709_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GWHTAZTZ038348
Cluster HCCA: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA19418 No alias 40S ribosomal protein S2-4 & original description: none 0.04 OrthoFinder
CSA011959.1 CSA011959 40S ribosomal protein S2-4 & original description: none 0.04 OrthoFinder
CSA032037.1 CSA032037 40S ribosomal protein S2-2 & original description: none 0.05 OrthoFinder
ECHA12132 No alias 40S ribosomal protein S2-4 & original description: none 0.14 OrthoFinder
FUDINGDABAI10103 No alias 40S ribosomal protein S2-4 & original description: none 0.03 OrthoFinder
FUDINGDABAI21622 No alias 40S ribosomal protein S2-2 & original description: none 0.03 OrthoFinder
GWHTACFB002688 No alias 40S ribosomal protein S2-4 & original description:... 0.03 OrthoFinder
GWHTACFB008006 No alias 40S ribosomal protein S2-2 & original description:... 0.11 OrthoFinder
GWHTAZTZ031852 No alias 40S ribosomal protein S2-4 & original description:... 0.04 OrthoFinder
HUANGJINYA11404 No alias 40S ribosomal protein S2-4 & original description: none 0.1 OrthoFinder
JINXUAN10566 No alias 40S ribosomal protein S2-4 & original description: none 0.03 OrthoFinder
LJCHANGYE15918 No alias 40S ribosomal protein S2-4 & original description: none 0.04 OrthoFinder
TIEGUANYIN03897 No alias 40S ribosomal protein S2-4 & original description: none 0.14 OrthoFinder
TIEGUANYIN14862 No alias 40S ribosomal protein S2-2 & original description: none 0.07 OrthoFinder
ZIJUAN24916 XW6 40S ribosomal protein S2-2 & original description: none 0.11 OrthoFinder
ANJIBAICHA19418 No alias 40S ribosomal protein S2-4 & original description: none 0.04 OrthoFinder
CSA011959.1 CSA011959 40S ribosomal protein S2-4 & original description: none 0.04 OrthoFinder
CSA032037.1 CSA032037 40S ribosomal protein S2-2 & original description: none 0.05 OrthoFinder
CSS0026711.1 CSS0026711 40S ribosomal protein S2-2 & original description:... 0.14 OrthoFinder
CSS0031755.1 CSS0031755 40S ribosomal protein S2-4 & original description:... 0.18 OrthoFinder
ECHA12132 No alias 40S ribosomal protein S2-4 & original description: none 0.14 OrthoFinder
FUDINGDABAI10103 No alias 40S ribosomal protein S2-4 & original description: none 0.03 OrthoFinder
FUDINGDABAI21622 No alias 40S ribosomal protein S2-2 & original description: none 0.03 OrthoFinder
GWHTACFB002688 No alias 40S ribosomal protein S2-4 & original description:... 0.03 OrthoFinder
GWHTACFB008006 No alias 40S ribosomal protein S2-2 & original description:... 0.11 OrthoFinder
GWHTAZTZ031852 No alias 40S ribosomal protein S2-4 & original description:... 0.04 OrthoFinder
HUANGJINYA11404 No alias 40S ribosomal protein S2-4 & original description: none 0.1 OrthoFinder
JINXUAN10566 No alias 40S ribosomal protein S2-4 & original description: none 0.03 OrthoFinder
LJCHANGYE15918 No alias 40S ribosomal protein S2-4 & original description: none 0.04 OrthoFinder
TIEGUANYIN03897 No alias 40S ribosomal protein S2-4 & original description: none 0.14 OrthoFinder
TIEGUANYIN14862 No alias 40S ribosomal protein S2-2 & original description: none 0.07 OrthoFinder
ZIJUAN24916 XW6 40S ribosomal protein S2-2 & original description: none 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
CC GO:0005762 mitochondrial large ribosomal subunit IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009399 nitrogen fixation IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0030866 cortical actin cytoskeleton organization IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 87 151
IPR005324 Ribosomal_S5_C 170 236
No external refs found!