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  5. GWHTAZTZ042443

GWHTAZTZ042443 (P40, AP40, RPSAA, RP40)


Aliases : P40, AP40, RPSAA, RP40

Description : 40S ribosomal protein SA & original description: Protein=GWHPAZTZ042443


Gene families : OG0008633 (OrthoFinder) Phylogenetic Tree(s): OG0008633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GWHTAZTZ042443
Cluster HCCA: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA57555 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.11 OrthoFinder
CSA020098.1 CSA020098,... 40S ribosomal protein SA & original description: none 0.14 OrthoFinder
CSA032868.1 RP40, CSA032868,... 40S ribosomal protein SA & original description: none 0.06 OrthoFinder
ECHA50883 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.07 OrthoFinder
FUDINGDABAI46263 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.07 OrthoFinder
GWHTACFB010475 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description:... 0.15 OrthoFinder
GWHTACFB010476 P40, RPSAA, RP40, AP40 40S ribosomal protein SA & original description:... 0.03 OrthoFinder
HUANGJINYA45430 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.19 OrthoFinder
JINXUAN52073 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.03 OrthoFinder
LJCHANGYE53031 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.15 OrthoFinder
TIEGUANYIN34435 AP40, P40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.1 OrthoFinder
ZHONGCHA48078 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.17 OrthoFinder
ZIJUAN05785 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.23 OrthoFinder
ZIJUAN51753 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.18 OrthoFinder
ANJIBAICHA57555 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.11 OrthoFinder
CSA020098.1 CSA020098,... 40S ribosomal protein SA & original description: none 0.14 OrthoFinder
CSA032868.1 RP40, CSA032868,... 40S ribosomal protein SA & original description: none 0.06 OrthoFinder
CSS0010613.1 CSS0010613,... 40S ribosomal protein SA & original description: gene=CSS0010613 0.15 OrthoFinder
CSS0011036.1 RP40,... 40S ribosomal protein SA & original description: gene=CSS0011036 0.14 OrthoFinder
ECHA50883 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.07 OrthoFinder
FUDINGDABAI46263 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.07 OrthoFinder
GWHTACFB010475 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description:... 0.15 OrthoFinder
GWHTACFB010476 P40, RPSAA, RP40, AP40 40S ribosomal protein SA & original description:... 0.03 OrthoFinder
HUANGJINYA45430 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.19 OrthoFinder
JINXUAN52073 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.03 OrthoFinder
LJCHANGYE53031 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.15 OrthoFinder
TIEGUANYIN34435 AP40, P40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.1 OrthoFinder
ZHONGCHA48078 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.17 OrthoFinder
ZIJUAN05785 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.23 OrthoFinder
ZIJUAN51753 P40, AP40, RPSAA, RP40 40S ribosomal protein SA & original description: none 0.18 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005762 mitochondrial large ribosomal subunit IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022618 protein-RNA complex assembly IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0071826 protein-RNA complex organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 61 128
No external refs found!