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  3. Camellia sinensis var. sinensis cv. 'Tieguanyin'
  4. Sequence
  5. TIEGUANYIN32686

TIEGUANYIN32686


Description : RuBisCO large subunit-binding protein subunit beta, chloroplastic & original description: none


Gene families : OG0006808 (OrthoFinder) Phylogenetic Tree(s): OG0006808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: TIEGUANYIN32686
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA53604 No alias RuBisCO large subunit-binding protein subunit beta,... 0.04 OrthoFinder
CSA008945.1 CSA008945 RuBisCO large subunit-binding protein subunit beta,... 0.11 OrthoFinder
ECHA49737 No alias RuBisCO large subunit-binding protein subunit beta,... 0.03 OrthoFinder
FUDINGDABAI46138 No alias RuBisCO large subunit-binding protein subunit beta,... 0.03 OrthoFinder
GWHTACFB002386 No alias RuBisCO large subunit-binding protein subunit beta,... 0.1 OrthoFinder
GWHTAZTZ003542 No alias RuBisCO large subunit-binding protein subunit beta,... 0.08 OrthoFinder
HUANGJINYA44424 No alias RuBisCO large subunit-binding protein subunit beta,... 0.1 OrthoFinder
JINXUAN47225 No alias RuBisCO large subunit-binding protein subunit beta,... 0.29 OrthoFinder
ZHONGCHA47531 No alias RuBisCO large subunit-binding protein subunit beta,... 0.03 OrthoFinder
ZIJUAN14825 No alias RuBisCO large subunit-binding protein subunit beta,... 0.09 OrthoFinder
ANJIBAICHA53604 No alias RuBisCO large subunit-binding protein subunit beta,... 0.04 OrthoFinder
CSA008945.1 CSA008945 RuBisCO large subunit-binding protein subunit beta,... 0.11 OrthoFinder
CSS0041773.1 CSS0041773 RuBisCO large subunit-binding protein subunit beta,... 0.08 OrthoFinder
ECHA49737 No alias RuBisCO large subunit-binding protein subunit beta,... 0.03 OrthoFinder
FUDINGDABAI46138 No alias RuBisCO large subunit-binding protein subunit beta,... 0.03 OrthoFinder
GWHTACFB002386 No alias RuBisCO large subunit-binding protein subunit beta,... 0.1 OrthoFinder
GWHTAZTZ003542 No alias RuBisCO large subunit-binding protein subunit beta,... 0.08 OrthoFinder
HUANGJINYA44424 No alias RuBisCO large subunit-binding protein subunit beta,... 0.1 OrthoFinder
JINXUAN47225 No alias RuBisCO large subunit-binding protein subunit beta,... 0.29 OrthoFinder
ZHONGCHA47531 No alias RuBisCO large subunit-binding protein subunit beta,... 0.03 OrthoFinder
ZIJUAN14825 No alias RuBisCO large subunit-binding protein subunit beta,... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-RNA exonuclease activity IEP HCCA
MF GO:0000339 RNA cap binding IEP HCCA
MF GO:0000340 RNA 7-methylguanosine cap binding IEP HCCA
BP GO:0001775 cell activation IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 RNA exonuclease activity IEP HCCA
MF GO:0004535 poly(A)-specific ribonuclease activity IEP HCCA
CC GO:0005577 fibrinogen complex IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016896 RNA exonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0030168 platelet activation IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 86 589
No external refs found!