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  5. CSA009269.1

CSA009269.1 (CSA009269)


Aliases : CSA009269

Description : Peptide deformylase 1A, chloroplastic & original description: none


Gene families : OG0012190 (OrthoFinder) Phylogenetic Tree(s): OG0012190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA009269.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA45010 PDF1A, ATDEF1 Peptide deformylase 1A, chloroplastic & original... 0.04 OrthoFinder
FUDINGDABAI34168 ATDEF1, PDF1A Peptide deformylase 1A, chloroplastic & original... 0.05 OrthoFinder
GWHTACFB010667 ATDEF1, PDF1A Peptide deformylase 1A, chloroplastic & original... 0.02 OrthoFinder
JINXUAN38523 ATDEF1, PDF1A Peptide deformylase 1A, chloroplastic & original... 0.03 OrthoFinder
ANJIBAICHA45010 PDF1A, ATDEF1 Peptide deformylase 1A, chloroplastic & original... 0.04 OrthoFinder
CSS0020299.1 PDF1A, CSS0020299, ATDEF1 Peptide deformylase 1A, chloroplastic & original... 0.02 OrthoFinder
CSS0024051.1 CSS0024051, ATDEF1, PDF1A Peptide deformylase 1A, chloroplastic & original... 0.02 OrthoFinder
FUDINGDABAI34168 ATDEF1, PDF1A Peptide deformylase 1A, chloroplastic & original... 0.05 OrthoFinder
GWHTACFB010667 ATDEF1, PDF1A Peptide deformylase 1A, chloroplastic & original... 0.02 OrthoFinder
JINXUAN38523 ATDEF1, PDF1A Peptide deformylase 1A, chloroplastic & original... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0042586 peptide deformylase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000002 mitochondrial genome maintenance IEP HCCA
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
CC GO:0009360 DNA polymerase III complex IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140993 histone modifying activity IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023635 Peptide_deformylase 93 153
No external refs found!