CSA009656.1 (CSA009656, CRR22)

Aliases : CSA009656, CRR22

Description : Pentatricopeptide repeat-containing protein At2g13600 & original description: none

Gene families : OG0013050 (OrthoFinder) Phylogenetic Tree(s): OG0013050_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CSA009656.1
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method	Actions
TIEGUANYIN09427	CRR22	Pentatricopeptide repeat-containing protein At2g13600 &...	0.03	OrthoFinder
TIEGUANYIN09427	CRR22	Pentatricopeptide repeat-containing protein At2g13600 &...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
BP	GO:0006417	regulation of translation	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
BP	GO:0042981	regulation of apoptotic process	IEA	Interproscan
BP	GO:0043067	regulation of programmed cell death	None	Extended
MF	GO:0045182	translation regulator activity	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008318	protein prenyltransferase activity	IEP	HCCA
BP	GO:0009061	anaerobic respiration	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010921	regulation of phosphatase activity	IEP	HCCA
BP	GO:0015947	methane metabolic process	IEP	HCCA
BP	GO:0015948	methanogenesis	IEP	HCCA
BP	GO:0015975	energy derivation by oxidation of reduced inorganic compounds	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0018342	protein prenylation	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019212	phosphatase inhibitor activity	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
MF	GO:0030269	tetrahydromethanopterin S-methyltransferase activity	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
MF	GO:0042086	5-methyl-5,6,7,8-tetrahydromethanopterin-dependent methyltransferase activity	IEP	HCCA
BP	GO:0043446	cellular alkane metabolic process	IEP	HCCA
BP	GO:0043447	alkane biosynthetic process	IEP	HCCA
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051336	regulation of hydrolase activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0097354	prenylation	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	157	205
IPR002885	Pentatricopeptide_repeat	507	554
IPR002885	Pentatricopeptide_repeat	582	606
IPR002885	Pentatricopeptide_repeat	373	401
IPR002885	Pentatricopeptide_repeat	52	79
IPR002885	Pentatricopeptide_repeat	402	431
IPR002885	Pentatricopeptide_repeat	342	362

External Links

No external refs found!

CSA009656.1 (CSA009656, CRR22)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation