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  3. Camellia sinensis var. assamica cv. 'Yunkang 10'
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  5. CSA015875.1

CSA015875.1 (CSA015875, RPL9)


Aliases : CSA015875, RPL9

Description : 50S ribosomal protein L9, chloroplastic & original description: none


Gene families : OG0016631 (OrthoFinder) Phylogenetic Tree(s): OG0016631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA015875.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA05400 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.03 OrthoFinder
ECHA01651 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.02 OrthoFinder
FUDINGDABAI21104 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.03 OrthoFinder
GWHTACFB004557 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.06 OrthoFinder
HUANGJINYA09527 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.04 OrthoFinder
TIEGUANYIN10462 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.1 OrthoFinder
ZHONGCHA10462 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.02 OrthoFinder
ZIJUAN33701 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.12 OrthoFinder
ANJIBAICHA05400 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.03 OrthoFinder
CSS0004051.1 CSS0004051, RPL9 50S ribosomal protein L9, chloroplastic & original... 0.07 OrthoFinder
CSS0044427.1 CSS0044427, RPL9 50S ribosomal protein L9, chloroplastic & original... 0.03 OrthoFinder
ECHA01651 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.02 OrthoFinder
FUDINGDABAI21104 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.03 OrthoFinder
GWHTACFB004557 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.06 OrthoFinder
HUANGJINYA09527 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.04 OrthoFinder
TIEGUANYIN10462 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.1 OrthoFinder
ZHONGCHA10462 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.02 OrthoFinder
ZIJUAN33701 RPL9 50S ribosomal protein L9, chloroplastic & original... 0.12 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0044419 biological process involved in interspecies interaction between organisms IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0005126 cytokine receptor binding IEP HCCA
MF GO:0005137 interleukin-5 receptor binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006955 immune response IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008239 dipeptidyl-peptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009235 cobalamin metabolic process IEP HCCA
BP GO:0009236 cobalamin biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0048472 threonine-phosphate decarboxylase activity IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070009 serine-type aminopeptidase activity IEP HCCA
MF GO:0070851 growth factor receptor binding IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR020069 Ribosomal_L9_C 112 194
IPR020070 Ribosomal_L9_N 51 96
No external refs found!