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  3. Camellia sinensis var. assamica cv. 'Yunkang 10'
  4. Sequence
  5. CSA023152.1

CSA023152.1 (ATSCAR3, SCAR3,...)


Aliases : ATSCAR3, SCAR3, CSA023152, WAVE2

Description : Protein SCAR3 & original description: none


Gene families : OG0012915 (OrthoFinder) Phylogenetic Tree(s): OG0012915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA023152.1
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA01993 WAVE2, ATSCAR3, SCAR3 Protein SCAR3 & original description: none 0.02 OrthoFinder
FUDINGDABAI57035 WAVE2, ATSCAR3, SCAR3 Protein SCAR3 & original description: none 0.02 OrthoFinder
GWHTACFB021712 WAVE2, SCAR3, ATSCAR3 Protein SCAR3 & original description: Protein=GWHPACFB021712 0.03 OrthoFinder
GWHTAZTZ025825 WAVE2, ATSCAR3, SCAR3 Protein SCAR3 & original description: Protein=GWHPAZTZ025825 0.02 OrthoFinder
LJCHANGYE62785 WAVE2, SCAR3, ATSCAR3 Protein SCAR3 & original description: none 0.02 OrthoFinder
TIEGUANYIN42599 WAVE2, SCAR3, ATSCAR3 Protein SCAR3 & original description: none 0.07 OrthoFinder
ZHONGCHA57693 WAVE2, ATSCAR3, SCAR3 Protein SCAR3 & original description: none 0.06 OrthoFinder
ANJIBAICHA01993 WAVE2, ATSCAR3, SCAR3 Protein SCAR3 & original description: none 0.02 OrthoFinder
CSS0032805.1 CSS0032805,... Protein SCAR3 & original description: gene=CSS0032805 0.12 OrthoFinder
FUDINGDABAI57035 WAVE2, ATSCAR3, SCAR3 Protein SCAR3 & original description: none 0.02 OrthoFinder
GWHTACFB021712 WAVE2, SCAR3, ATSCAR3 Protein SCAR3 & original description: Protein=GWHPACFB021712 0.03 OrthoFinder
GWHTAZTZ025825 WAVE2, ATSCAR3, SCAR3 Protein SCAR3 & original description: Protein=GWHPAZTZ025825 0.02 OrthoFinder
LJCHANGYE62785 WAVE2, SCAR3, ATSCAR3 Protein SCAR3 & original description: none 0.02 OrthoFinder
TIEGUANYIN42599 WAVE2, SCAR3, ATSCAR3 Protein SCAR3 & original description: none 0.07 OrthoFinder
ZHONGCHA57693 WAVE2, ATSCAR3, SCAR3 Protein SCAR3 & original description: none 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004529 DNA exonuclease activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008855 exodeoxyribonuclease VII activity IEP HCCA
CC GO:0009341 beta-galactosidase complex IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016895 DNA exonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!