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  3. Camellia sinensis var. assamica cv. 'Yunkang 10'
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  5. CSA023298.1

CSA023298.1 (CP31B, CSA023298)


Aliases : CP31B, CSA023298

Description : 31 kDa ribonucleoprotein, chloroplastic & original description: none


Gene families : OG0008536 (OrthoFinder) Phylogenetic Tree(s): OG0008536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA023298.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
GWHTACFB030944 CP31B 31 kDa ribonucleoprotein, chloroplastic & original... 0.06 OrthoFinder
HUANGJINYA37015 ATRBP31, CP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.03 OrthoFinder
JINXUAN43147 ATRBP31, RBP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.04 OrthoFinder
TIEGUANYIN28892 ATRBP31, RBP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.05 OrthoFinder
ZHONGCHA40022 ATRBP31, CP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.06 OrthoFinder
CSS0002215.1 ATRBP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.03 OrthoFinder
CSS0032937.1 CSS0032937,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.03 OrthoFinder
GWHTACFB030944 CP31B 31 kDa ribonucleoprotein, chloroplastic & original... 0.06 OrthoFinder
HUANGJINYA37015 ATRBP31, CP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.03 OrthoFinder
JINXUAN43147 ATRBP31, RBP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.04 OrthoFinder
TIEGUANYIN28892 ATRBP31, RBP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.05 OrthoFinder
ZHONGCHA40022 ATRBP31, CP31,... 31 kDa ribonucleoprotein, chloroplastic & original... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005762 mitochondrial large ribosomal subunit IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
BP GO:0007339 binding of sperm to zona pellucida IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009988 cell-cell recognition IEP HCCA
MF GO:0015049 methane monooxygenase activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015947 methane metabolic process IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0032543 mitochondrial translation IEP HCCA
BP GO:0035036 sperm-egg recognition IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043446 cellular alkane metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
MF GO:0051087 protein-folding chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0070840 dynein complex binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 215 244
IPR000504 RRM_dom 143 173
No external refs found!