CSA024339.1 (CSA024339)

Aliases : CSA024339

Description : Elongation factor Tu, mitochondrial & original description: none

Gene families : OG0013842 (OrthoFinder) Phylogenetic Tree(s): OG0013842_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CSA024339.1
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
ANJIBAICHA19541	No alias	Elongation factor Tu, mitochondrial & original description: none	0.03	OrthoFinder
ECHA65941	No alias	Elongation factor Tu, mitochondrial & original description: none	0.07	OrthoFinder
FUDINGDABAI15042	No alias	Elongation factor Tu, mitochondrial & original description: none	0.12	OrthoFinder
GWHTACFB005307	No alias	Elongation factor Tu, mitochondrial & original...	0.05	OrthoFinder
GWHTAZTZ033735	No alias	Elongation factor Tu, mitochondrial & original...	0.13	OrthoFinder
HUANGJINYA06857	No alias	Elongation factor Tu, mitochondrial & original description: none	0.13	OrthoFinder
JINXUAN03707	No alias	Elongation factor Tu, mitochondrial & original description: none	0.09	OrthoFinder
LJCHANGYE05481	No alias	Elongation factor Tu, mitochondrial & original description: none	0.08	OrthoFinder
TIEGUANYIN46344	No alias	Elongation factor Tu, mitochondrial & original description: none	0.14	OrthoFinder
ZHONGCHA59008	No alias	Elongation factor Tu, mitochondrial & original description: none	0.11	OrthoFinder
ZIJUAN58775	No alias	Elongation factor Tu, mitochondrial & original description: none	0.1	OrthoFinder
ANJIBAICHA19541	No alias	Elongation factor Tu, mitochondrial & original description: none	0.03	OrthoFinder
CSS0001241.1	CSS0001241	Elongation factor Tu, mitochondrial & original...	0.03	OrthoFinder
ECHA65941	No alias	Elongation factor Tu, mitochondrial & original description: none	0.07	OrthoFinder
FUDINGDABAI15042	No alias	Elongation factor Tu, mitochondrial & original description: none	0.12	OrthoFinder
GWHTACFB005307	No alias	Elongation factor Tu, mitochondrial & original...	0.05	OrthoFinder
GWHTAZTZ033735	No alias	Elongation factor Tu, mitochondrial & original...	0.13	OrthoFinder
HUANGJINYA06857	No alias	Elongation factor Tu, mitochondrial & original description: none	0.13	OrthoFinder
JINXUAN03707	No alias	Elongation factor Tu, mitochondrial & original description: none	0.09	OrthoFinder
LJCHANGYE05481	No alias	Elongation factor Tu, mitochondrial & original description: none	0.08	OrthoFinder
TIEGUANYIN46344	No alias	Elongation factor Tu, mitochondrial & original description: none	0.14	OrthoFinder
ZHONGCHA59008	No alias	Elongation factor Tu, mitochondrial & original description: none	0.11	OrthoFinder
ZIJUAN58775	No alias	Elongation factor Tu, mitochondrial & original description: none	0.1	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	HCCA
BP	GO:0000921	septin ring assembly	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005681	spliceosomal complex	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
CC	GO:0005940	septin ring	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0008455	alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	IEP	HCCA
BP	GO:0009061	anaerobic respiration	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010921	regulation of phosphatase activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0015947	methane metabolic process	IEP	HCCA
BP	GO:0015948	methanogenesis	IEP	HCCA
BP	GO:0015975	energy derivation by oxidation of reduced inorganic compounds	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016987	sigma factor activity	IEP	HCCA
BP	GO:0017038	protein import	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019212	phosphatase inhibitor activity	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
MF	GO:0030269	tetrahydromethanopterin S-methyltransferase activity	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
BP	GO:0031106	septin ring organization	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
CC	GO:0032156	septin cytoskeleton	IEP	HCCA
BP	GO:0032185	septin cytoskeleton organization	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
MF	GO:0042086	5-methyl-5,6,7,8-tetrahydromethanopterin-dependent methyltransferase activity	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0043446	cellular alkane metabolic process	IEP	HCCA
BP	GO:0043447	alkane biosynthetic process	IEP	HCCA
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0051087	protein-folding chaperone binding	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051336	regulation of hydrolase activity	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
MF	GO:0060590	ATPase regulator activity	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
BP	GO:0071824	protein-DNA complex organization	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004160	Transl_elong_EFTu/EF1A_C	354	448
IPR000795	T_Tr_GTP-bd_dom	62	255
IPR004161	EFTu-like_2	279	349

External Links

No external refs found!

CSA024339.1 (CSA024339)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation