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  5. CSA028031.1

CSA028031.1 (NCLPP4, CSA028031, CLPP4)


Aliases : NCLPP4, CSA028031, CLPP4

Description : ATP-dependent Clp protease proteolytic subunit 4, chloroplastic & original description: none


Gene families : OG0002848 (OrthoFinder) Phylogenetic Tree(s): OG0002848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA028031.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA37734 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
ECHA32162 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.04 OrthoFinder
FUDINGDABAI17763 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.09 OrthoFinder
GWHTACFB032771 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
GWHTAZTZ039839 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
LJCHANGYE23919 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.14 OrthoFinder
TIEGUANYIN11023 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.1 OrthoFinder
ZHONGCHA22004 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.05 OrthoFinder
ZIJUAN33094 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.04 OrthoFinder
ANJIBAICHA37734 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
CSS0012686.1 CLPP4, NCLPP4, CSS0012686 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
ECHA32162 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.04 OrthoFinder
FUDINGDABAI17763 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.09 OrthoFinder
GWHTACFB032771 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
GWHTAZTZ039839 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.03 OrthoFinder
LJCHANGYE23919 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.14 OrthoFinder
TIEGUANYIN11023 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.1 OrthoFinder
ZHONGCHA22004 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.05 OrthoFinder
ZIJUAN33094 NCLPP4, CLPP4 ATP-dependent Clp protease proteolytic subunit 4,... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0051087 protein-folding chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 105 279
No external refs found!