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  5. CSA036680.1

CSA036680.1 (CSA036680)


Aliases : CSA036680

Description : PHD finger protein At3g20280 & original description: none


Gene families : OG0004698 (OrthoFinder) Phylogenetic Tree(s): OG0004698_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CSA036680.1
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
HUANGJINYA14214 No alias PHD finger protein At3g20280 & original description: none 0.03 OrthoFinder
HUANGJINYA14214 No alias PHD finger protein At3g20280 & original description: none 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
MF GO:0004520 DNA endonuclease activity IEP HCCA
MF GO:0004536 DNA nuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0007276 gamete generation IEP HCCA
BP GO:0007283 spermatogenesis IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0009036 type II site-specific deoxyribonuclease activity IEP HCCA
BP GO:0009307 DNA restriction-modification system IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
MF GO:0015666 restriction endodeoxyribonuclease activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035092 sperm DNA condensation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044355 clearance of foreign intracellular DNA IEP HCCA
BP GO:0048232 male gamete generation IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0099046 clearance of foreign intracellular nucleic acids IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 338 386
No external refs found!