1. Home
  2. Species
  3. Camellia sinensis var. sinensis cv. 'Longjing Changye'
  4. Sequence
  5. LJCHANGYE01859

LJCHANGYE01859


Description : no annotation & original description: none


Gene families : OG0011196 (OrthoFinder) Phylogenetic Tree(s): OG0011196_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE01859
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA05884 No alias no annotation & original description: none 0.04 OrthoFinder
FUDINGDABAI01694 No alias no annotation & original description: none 0.04 OrthoFinder
TIEGUANYIN43489 No alias no annotation & original description: none 0.11 OrthoFinder
ANJIBAICHA05884 No alias no annotation & original description: none 0.04 OrthoFinder
FUDINGDABAI01694 No alias no annotation & original description: none 0.04 OrthoFinder
TIEGUANYIN43489 No alias no annotation & original description: none 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005762 mitochondrial large ribosomal subunit IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 protein-RNA complex assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0070034 telomerase RNA binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071826 protein-RNA complex organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1904868 telomerase catalytic core complex assembly IEP HCCA
BP GO:1905323 telomerase holoenzyme complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 184 232
No external refs found!