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  3. Camellia sinensis var. sinensis cv. 'Longjing Changye'
  4. Sequence
  5. LJCHANGYE41859

LJCHANGYE41859


Description : no annotation & original description: none


Gene families : OG0009787 (OrthoFinder) Phylogenetic Tree(s): OG0009787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE41859
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
ECHA39474 No alias no annotation & original description: none 0.03 OrthoFinder
FUDINGDABAI36079 No alias no annotation & original description: none 0.04 OrthoFinder
TIEGUANYIN25984 No alias no annotation & original description: none 0.03 OrthoFinder
ZIJUAN00077 No alias no annotation & original description: none 0.02 OrthoFinder
ECHA39474 No alias no annotation & original description: none 0.03 OrthoFinder
FUDINGDABAI36079 No alias no annotation & original description: none 0.04 OrthoFinder
TIEGUANYIN25984 No alias no annotation & original description: none 0.03 OrthoFinder
ZIJUAN00077 No alias no annotation & original description: none 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0023041 neuronal signal transduction IEP HCCA
CC GO:0030289 protein phosphatase 4 complex IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030867 rough endoplasmic reticulum membrane IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
CC GO:0033644 host cell membrane IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0044384 host outer membrane IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR019098 Histone_chaperone_domain_CHZ 419 450
No external refs found!