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  5. LJCHANGYE50409

LJCHANGYE50409


Description : Protein GAMETE CELL DEFECTIVE 1, mitochondrial & original description: none


Gene families : OG0012376 (OrthoFinder) Phylogenetic Tree(s): OG0012376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE50409
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
HUANGJINYA43588 No alias Protein GAMETE CELL DEFECTIVE 1, mitochondrial &... 0.02 OrthoFinder
HUANGJINYA43588 No alias Protein GAMETE CELL DEFECTIVE 1, mitochondrial &... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000408 EKC/KEOPS complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
BP GO:0001503 ossification IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004529 DNA exonuclease activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005219 ryanodine-sensitive calcium-release channel activity IEP HCCA
MF GO:0005262 calcium channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005942 phosphatidylinositol 3-kinase complex IEP HCCA
CC GO:0005944 phosphatidylinositol 3-kinase complex, class IB IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006873 intracellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 intracellular calcium ion homeostasis IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
MF GO:0008855 exodeoxyribonuclease VII activity IEP HCCA
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009235 cobalamin metabolic process IEP HCCA
BP GO:0009236 cobalamin biosynthetic process IEP HCCA
BP GO:0009307 DNA restriction-modification system IEP HCCA
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015278 calcium-release channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016895 DNA exonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030003 intracellular monoatomic cation homeostasis IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030289 protein phosphatase 4 complex IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035014 phosphatidylinositol 3-kinase regulator activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044355 clearance of foreign intracellular DNA IEP HCCA
MF GO:0046332 SMAD binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046935 1-phosphatidylinositol-3-kinase regulator activity IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 intracellular chemical homeostasis IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097651 phosphatidylinositol 3-kinase complex, class I IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098657 import into cell IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098704 carbohydrate import across plasma membrane IEP HCCA
BP GO:0098739 import across plasma membrane IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0099046 clearance of foreign intracellular nucleic acids IEP HCCA
MF GO:0099094 ligand-gated monoatomic cation channel activity IEP HCCA
MF GO:0099604 ligand-gated calcium channel activity IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!