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  5. LJCHANGYE51691

LJCHANGYE51691 (TSBtype2)


Aliases : TSBtype2

Description : Tryptophan synthase beta chain 2, chloroplastic & original description: none


Gene families : OG0020345 (OrthoFinder) Phylogenetic Tree(s): OG0020345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE51691
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
CSA021499.1 CSA021499, TSBtype2 Tryptophan synthase beta chain 2, chloroplastic &... 0.03 OrthoFinder
ZHONGCHA43977 TSBtype2 Tryptophan synthase beta chain 2, chloroplastic &... 0.05 OrthoFinder
CSA021499.1 CSA021499, TSBtype2 Tryptophan synthase beta chain 2, chloroplastic &... 0.03 OrthoFinder
ZHONGCHA43977 TSBtype2 Tryptophan synthase beta chain 2, chloroplastic &... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
CC GO:0001401 SAM complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006382 adenosine to inosine editing IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022618 protein-RNA complex assembly IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0070034 telomerase RNA binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071826 protein-RNA complex organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1904868 telomerase catalytic core complex assembly IEP HCCA
BP GO:1905323 telomerase holoenzyme complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 123 461
No external refs found!