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  3. Camellia sinensis var. sinensis cv. 'Longjing Changye'
  4. Sequence
  5. LJCHANGYE57159

LJCHANGYE57159


Description : no annotation & original description: none


Gene families : OG0006691 (OrthoFinder) Phylogenetic Tree(s): OG0006691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LJCHANGYE57159
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
ANJIBAICHA61457 No alias no annotation & original description: none 0.03 OrthoFinder
FUDINGDABAI49048 No alias no annotation & original description: none 0.03 OrthoFinder
JINXUAN54728 No alias no annotation & original description: none 0.06 OrthoFinder
TIEGUANYIN35699 No alias no annotation & original description: none 0.03 OrthoFinder
ZHONGCHA48889 No alias no annotation & original description: none 0.03 OrthoFinder
ZIJUAN44064 No alias no annotation & original description: none 0.04 OrthoFinder
ANJIBAICHA61457 No alias no annotation & original description: none 0.03 OrthoFinder
CSS0034094.1 CSS0034094 no annotation & original description: gene=CSS0034094 0.03 OrthoFinder
FUDINGDABAI49048 No alias no annotation & original description: none 0.03 OrthoFinder
JINXUAN54728 No alias no annotation & original description: none 0.06 OrthoFinder
TIEGUANYIN35699 No alias no annotation & original description: none 0.03 OrthoFinder
ZHONGCHA48889 No alias no annotation & original description: none 0.03 OrthoFinder
ZIJUAN44064 No alias no annotation & original description: none 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000921 septin ring assembly IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005940 septin ring IEP HCCA
CC GO:0005942 phosphatidylinositol 3-kinase complex IEP HCCA
CC GO:0005944 phosphatidylinositol 3-kinase complex, class IB IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP HCCA
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0030684 preribosome IEP HCCA
BP GO:0031106 septin ring organization IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032156 septin cytoskeleton IEP HCCA
BP GO:0032185 septin cytoskeleton organization IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035014 phosphatidylinositol 3-kinase regulator activity IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0046935 1-phosphatidylinositol-3-kinase regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex organization IEP HCCA
CC GO:0097651 phosphatidylinositol 3-kinase complex, class I IEP HCCA
MF GO:0106370 protein-L-histidine N-pros-methyltransferase activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR024576 rRNA_MeTfrase_Spb1_DUF3381 234 386
IPR002877 RNA_MeTrfase_FtsJ_dom 22 199
IPR012920 rRNA_MeTfrase_SPB1-like_C 617 815
No external refs found!