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  3. Camellia sinensis var. sinensis cv. 'Zhongcha 108'
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  5. ZHONGCHA11722

ZHONGCHA11722 (YCF32, PSBY)


Aliases : YCF32, PSBY

Description : Photosystem II core complex proteins psbY, chloroplastic & original description: none


Gene families : OG0030059 (OrthoFinder) Phylogenetic Tree(s): OG0030059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ZHONGCHA11722
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
ECHA10869 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.02 OrthoFinder
FUDINGDABAI10823 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.19 OrthoFinder
GWHTACFB004004 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.24 OrthoFinder
GWHTAZTZ029668 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.07 OrthoFinder
HUANGJINYA10443 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.1 OrthoFinder
LJCHANGYE14550 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.19 OrthoFinder
CSS0012497.1 YCF32, CSS0012497, PSBY Photosystem II core complex proteins psbY,... 0.1 OrthoFinder
ECHA10869 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.02 OrthoFinder
FUDINGDABAI10823 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.19 OrthoFinder
GWHTACFB004004 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.24 OrthoFinder
GWHTAZTZ029668 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.07 OrthoFinder
HUANGJINYA10443 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.1 OrthoFinder
LJCHANGYE14550 YCF32, PSBY Photosystem II core complex proteins psbY,... 0.19 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0050525 cutinase activity IEP HCCA
MF GO:0051087 protein-folding chaperone binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 159 191
IPR009388 PSII_PsbY 90 122
No external refs found!